Get genotyping protocol metadata for a single germplasm

Queries the T3 AJAX interface using the $wizard() method of a brapiConnection to determine which genotyping protocols have been used for a specific germplasm

Usage

getGenoProtocolFromSingleGerm(germ_id, brapiConnection, verbose = F)

Arguments

germ_id

The germplasmDbId for the accession of interest.

brapiConnection

A BrAPI connection object, typically from BrAPI::createBrAPIConnection(), with a $wizard() method.

verbose

Logical; if TRUE, prints progress messages.

Value

A tibble with a single row containing germplasmDbId, genoProtocolDbId, and genoProtocolName. The genotyping protocol columns are list columns, potentially containing multiple protocol IDs/names.

Examples

if (FALSE) { # \dontrun{
brapiConn <- BrAPI::createBrAPIConnection("wheat-sandbox.triticeaetoolbox.org", is_breedbase = TRUE)

winner_geno_protocols <- getGenoProtocolFromGermVec("1284387", brapiConn)
winner_geno_protocols
} # }